ANN: mahotas 1.0.1

Discussion:

ANN: mahotas 1.0.1

Luis Pedro Coelho

2013-07-10 06:47:06 UTC

Hello list participants,

I just released mahotas 1.0.1

This contains an important bugfix to Haralick features by Tony S Yu.

Full ChangeLog:

* Add lbp_transform() function
* Add rgb2sepia function
* Add mahotas.demos.nuclear_image() function
* Work around matplotlib.imsave's implementation of greyscale
* Fix Haralick bug (report & patch by Tony S Yu)
* Add count_binary1s() function

Use "pip install mahotas --upgrade" to upgrade.

Mahotas
-------

Mahotas is a computer vision library. Algorithms operate on numpy
arrays, but are implemented in C++ for speed (efficiency is a major
concern of mahotas).

It includes algorithms such as watershed, morphological operations,
feature computation (Haralick features, Zernike moments, and SURF), and
other tidbits.

License: MIT

Citation

**Luis Pedro Coelho** Mahotas: Open source software for scriptable
computer vision in Journal of Open Research Software, 2013.

Release: http://pypi.python.org/pypi/mahotas
Repository: http://github.com/luispedro/mahotas
API Docs: https://mahotas.readthedocs.org/en/latest/
Mailing List: http://groups.google.com/group/pythonvision
General webpage: http://luispedro.org/software/mahotas

Thanks

--
Luis Pedro Coelho | EMBL | http://luispedro.org
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jip

2013-07-10 12:02:35 UTC

Permalink

Dear Luis,
I met the following error when trying to update on ubuntu 13.04:

$ sudo pip install mahotas --upgrade
Downloading/unpacking mahotas from
https://pypi.python.org/packages/source/m/mahotas/mahotas-1.0.1.tar.gz#md5=4e9c412595431435ad1cf42a37f6daac
Downloading mahotas-1.0.1.tar.gz (1.5MB): 1.5MB downloaded
Running setup.py egg_info for package mahotas
Traceback (most recent call last):
File "<string>", line 16, in <module>
File "/tmp/pip-build-root/mahotas/setup.py", line 86, in <module>
tests_require = open('tests-requirments.txt').read()
IOError: [Errno 2] No such file or directory: 'tests-requirments.txt'
Complete output from command python setup.py egg_info:
Traceback (most recent call last):

File "<string>", line 16, in <module>

File "/tmp/pip-build-root/mahotas/setup.py", line 86, in <module>

tests_require = open('tests-requirments.txt').read()

IOError: [Errno 2] No such file or directory: 'tests-requirments.txt'

Post by Luis Pedro Coelho
Hello list participants,
I just released mahotas 1.0.1
This contains an important bugfix to Haralick features by Tony S Yu.
* Add lbp_transform() function
* Add rgb2sepia function
* Add mahotas.demos.nuclear_image() function
* Work around matplotlib.imsave's implementation of greyscale
* Fix Haralick bug (report & patch by Tony S Yu)
* Add count_binary1s() function
Use "pip install mahotas --upgrade" to upgrade.
Mahotas
-------
Mahotas is a computer vision library. Algorithms operate on numpy
arrays, but are implemented in C++ for speed (efficiency is a major
concern of mahotas).
It includes algorithms such as watershed, morphological operations,
feature computation (Haralick features, Zernike moments, and SURF), and
other tidbits.
License: MIT
Citation
**Luis Pedro Coelho** Mahotas: Open source software for scriptable
computer vision in Journal of Open Research Software, 2013.
Release: http://pypi.python.org/pypi/mahotas
Repository: http://github.com/luispedro/mahotas
API Docs: https://mahotas.readthedocs.org/en/latest/
Mailing List: http://groups.google.com/group/pythonvision
General webpage: http://luispedro.org/software/mahotas
Thanks
--
Luis Pedro Coelho | EMBL | http://luispedro.org

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jip

2013-07-10 12:10:26 UTC

Permalink

Renaming the file requirements.txt into tests-requirments fixed the
building issue.

Luis Pedro Coelho

2013-07-10 12:12:16 UTC

Permalink

Post by jip
Renaming the file requirements.txt into tests-requirments fixed the
building issue.

Aaargh.

Two bugs:

1. requirements is mispelled.
2. the file was not included in the distribution.

I'll fix both & re-release.

Luis Pedro Coelho

2013-07-10 12:22:05 UTC

Permalink

It was the same bug, only files called *requirements.txt were included.

Should be fixed now (as version 1.0.2).

Thanks!
Luis

Post by Luis Pedro Coelho

Post by jip
Renaming the file requirements.txt into tests-requirments fixed the
building issue.

Aaargh.
1. requirements is mispelled.
2. the file was not included in the distribution.
I'll fix both & re-release.

--
Luis Pedro Coelho | EMBL | http://metarabbit.wordpress.com
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jip

2013-07-10 20:38:07 UTC

Permalink

thank you

jean-patrick